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encyclopedia of Rare Disease Annotation for Precision Medicine



   idiopathic pulmonary arterial hypertension
  

Disease ID 820
Disease idiopathic pulmonary arterial hypertension
Definition
Increased blood pressure in the arteries of the lungs; the etiology is unknown.
Synonym
essential pulmonary hypertension
hypertension primary pulmonary
hypertension, pulmonary, primary
idiopathic pulmonary hypertension
ipah
ppht - primary pulmonary hypertension
prim pulm hypertension
primary pulmonary hypertension
primary pulmonary hypertension (disorder)
pulmonary hypertension primary
pulmonary hypertension, essential
pulmonary hypertension, idiopathic
pulmonary hypertension, primary
pulmonary primary hypertension
Orphanet
DOID
ICD10
UMLS
C0152171
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:27)
C0009782  |  connective tissue disease  |  8
C1619734  |  pulmonary arterial hypertension  |  3
C0018799  |  heart disease  |  3
C0152021  |  congenital heart disease  |  3
C0009782  |  connective tissue diseases  |  2
C0013371  |  shigella  |  2
C0036421  |  systemic sclerosis  |  2
C0018801  |  heart failure  |  2
C0153500  |  heart ca  |  1
C0018799  |  cardiac disorders  |  1
C0011644  |  scleroderma  |  1
C0018802  |  congestive heart failure  |  1
C0020538  |  hypertension  |  1
C0600260  |  obstructive pulmonary disease  |  1
C0018799  |  heart diseases  |  1
C0028754  |  obesity  |  1
C0266526  |  norrie disease  |  1
C0002871  |  anemia  |  1
C0398623  |  hypercoagulability  |  1
C0024115  |  pulmonary disease  |  1
C0020542  |  pulmonary hypertension  |  1
C0024117  |  chronic obstructive pulmonary disease  |  1
C1527336  |  sjogren's syndrome  |  1
C0020550  |  hyperthyroidism  |  1
C0042373  |  vascular disease  |  1
C0040053  |  thrombosis  |  1
C1145670  |  respiratory failure  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:1)
659  |  BMPR2  |  CLINVAR;GHR;UNIPROT
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:61)
93  |  ACVR2B  |  2.527  |  DISEASES
94  |  ACVRL1  |  4.381  |  DISEASES
501  |  ALDH7A1  |  1.488  |  DISEASES
240  |  ALOX5  |  1.421  |  DISEASES
241  |  ALOX5AP  |  1.204  |  DISEASES
23365  |  ARHGEF12  |  1.486  |  DISEASES
23545  |  ATP6V0A2  |  1.525  |  DISEASES
650  |  BMP2  |  2.456  |  DISEASES
655  |  BMP7  |  1.504  |  DISEASES
659  |  BMPR2  |  6.617  |  DISEASES
796  |  CALCA  |  1.229  |  DISEASES
978  |  CDA  |  1.09  |  DISEASES
1059  |  CENPB  |  1.484  |  DISEASES
1186  |  CLCN7  |  1.492  |  DISEASES
1558  |  CYP2C8  |  1.17  |  DISEASES
6993  |  DYNLT1  |  1.563  |  DISEASES
1889  |  ECE1  |  1.188  |  DISEASES
1906  |  EDN1  |  4.227  |  DISEASES
1910  |  EDNRB  |  1.603  |  DISEASES
10938  |  EHD1  |  1.221  |  DISEASES
2022  |  ENG  |  1.091  |  DISEASES
3266  |  ERAS  |  1.978  |  DISEASES
5394  |  EXOSC10  |  1.196  |  DISEASES
2152  |  F3  |  1.525  |  DISEASES
2200  |  FBN1  |  2.115  |  DISEASES
2317  |  FLNB  |  1.489  |  DISEASES
22862  |  FNDC3A  |  1.864  |  DISEASES
2550  |  GABBR1  |  1.789  |  DISEASES
8200  |  GDF5  |  1.362  |  DISEASES
9402  |  GRAP2  |  1.456  |  DISEASES
8091  |  HMGA2  |  1.326  |  DISEASES
3150  |  HMGN1  |  2.162  |  DISEASES
3151  |  HMGN2  |  2.45  |  DISEASES
3212  |  HOXB2  |  2.358  |  DISEASES
3363  |  HTR7  |  3.333  |  DISEASES
3397  |  ID1  |  1.775  |  DISEASES
259307  |  IL4I1  |  2.423  |  DISEASES
1316  |  KLF6  |  1.226  |  DISEASES
3984  |  LIMK1  |  1.364  |  DISEASES
27030  |  MLH3  |  1.829  |  DISEASES
4311  |  MME  |  1.374  |  DISEASES
4624  |  MYH6  |  1.016  |  DISEASES
4782  |  NFIC  |  1.282  |  DISEASES
4878  |  NPPA  |  1.448  |  DISEASES
4879  |  NPPB  |  1.108  |  DISEASES
8654  |  PDE5A  |  2.849  |  DISEASES
9124  |  PDLIM1  |  1.351  |  DISEASES
6152  |  RPL24  |  1.24  |  DISEASES
462  |  SERPINC1  |  1.583  |  DISEASES
6580  |  SLC22A1  |  1.512  |  DISEASES
6582  |  SLC22A2  |  1.742  |  DISEASES
9356  |  SLC22A6  |  1.758  |  DISEASES
9376  |  SLC22A8  |  1.523  |  DISEASES
4093  |  SMAD9  |  3.074  |  DISEASES
11005  |  SPINK5  |  1.185  |  DISEASES
7042  |  TGFB2  |  1.239  |  DISEASES
7048  |  TGFBR2  |  1.945  |  DISEASES
7056  |  THBD  |  2.5  |  DISEASES
8718  |  TNFRSF25  |  1.356  |  DISEASES
7432  |  VIP  |  1.179  |  DISEASES
23038  |  WDTC1  |  1.018  |  DISEASES
Locus(Waiting for update.)
Disease ID 820
Disease idiopathic pulmonary arterial hypertension
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:18)
HP:0001635  |  Congestive heart failure
HP:0001962  |  Palpitations
HP:3000042  |  Abnormality of jugular vein
HP:0002094  |  Dyspnea
HP:0002105  |  Hemoptysis
HP:0010741  |  Edema of the lower limbs
HP:0005180  |  Tricuspid regurgitation
HP:0003549  |  Abnormality of connective tissue
HP:0004890  |  Elevated pulmonary artery pressure
HP:0001279  |  Syncope
HP:0012098  |  Edema of the dorsum of feet
HP:0001667  |  Right ventricular hypertrophy
HP:0100749  |  Chest pain
HP:0030148  |  Heart murmur
HP:0002092  |  Pulmonary arterial hypertension
HP:0001785  |  Ankle swelling
HP:0005317  |  Increased pulmonary vascular resistance
HP:0004870  |  Chronic hemolytic anemia
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:29)
Disease ID 820
Disease idiopathic pulmonary arterial hypertension
Manually Symptom
UMLS  | Name(Total Manually Symptoms:4)
C2364118  |  weakness
C0344706  |  right atrial appendage aneurysm
C0032227  |  pleural effusions
C0018801  |  heart failure
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:5)
C0018801  |  heart failure  |  2
C0856169  |  endothelial dysfunction  |  1
C0344706  |  right atrial appendage aneurysm  |  1
C1839611  |  n syndrome  |  1
C0040038  |  thromboembolism  |  1
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:20)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs10744676205568233741KCNA5umls:C0152171BeFreeOur results provide the first evidence for an association between the KCNA5 rs10744676 variant and PAH associated with SSc.0.0019000932010KCNA5125043783CT
rs137852741NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202556360CG,T
rs13785274121622843659BMPR2umls:C0152171BeFreeThree BMPR2 mutants, D485G, N519K, and R899X, which are known to be involved in PAH, were chosen as our model system.0.153387352011BMPR22202556360CG,T
rs137852742NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202464950CG
rs137852743NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202467625TG
rs137852744NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202530866GA
rs137852745NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202552756AG
rs13785274521622843659BMPR2umls:C0152171BeFreeThree BMPR2 mutants, D485G, N519K, and R899X, which are known to be involved in PAH, were chosen as our model system.0.153387352011BMPR22202552756AG
rs137852746NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202552773CT
rs137852747NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202513807CA
rs137852748NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202556282CT
rs137852749NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202552774GA
rs137852750NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202467638TA,C
rs137852751NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202530820CT
rs137852752NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202556361GA,C
rs13785275215965979659BMPR2umls:C3203102UNIPROTBMPR2 mutations have short lifetime expectancy in primary pulmonary hypertension.0.2103147912005BMPR22202556361GA,C
rs137852753NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202518831CT
rs34478120967855343170OR14K1umls:C0152171BeFreeIn the Italian cohort, the rs344781 G allele was associated with SSc-related digital ulceration (odds ratio [OR] 1.39), pulmonary arterial hypertension (PAH) (OR 1.81), anticentromere antibody (ACA) positivity (OR 1.45), and limited cutaneous SSc (lcSSc) (OR 1.37).0.0002714422011PLAUR1943670636CT
rs483352902NA659BMPR2umls:C0152171CLINVARNA0.15338735NABMPR22202377518C-
rs5743704219050087097TLR2umls:C0152171BeFreeAmong patients with SSc, the rare TLR2 Pro631His variant is robustly associated with antitopoisomerase positivity, the diffuse form of the disease, and the development of PAH.0.0002714422012TLR24153704799CA
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:6)
HP ID HP Name MP ID MP Name Annotation
HP:0001667Right ventricular hypertrophyMP:0010420muscular ventricular septal defectabnormal communications between the two lower chambers of the heart, involving the muscular septum and often occurring as multiple communications, and includes central muscular or midmuscular, apical, or marginal communications when the defect is along th
HP:0001635Congestive heart failureMP:0011925abnormal heart echocardiography featureany anomaly in echocardiographic representation of systolic and diastolic function, ventricular compliance, valvular function, or interventricular septum features
HP:0010741Edema of the lower limbsMP:0009657failure of chorioallantoic fusionfailure to initiate and/or complete the formation of a highly vascularized extra-embryonic fetal membrane by fusion of the chorion and allantois
HP:0002092Pulmonary hypertensionMP:0005258ocular hypertensionabnormal elevation of the intraocular pressure
HP:0005317Increased pulmonary vascular resistanceMP:0010935increased airway resistancegreater opposition to flow of air caused by the forces of friction, measured as the ratio of driving pressure to the rate of air flow
HP:0004870Chronic hemolytic anemiaMP:0001585hemolytic anemiadeficiency of red cells resulting from an increased rate of erythrocyte destruction
Mapped by homologous gene(Total Items:15)
HP ID HP Name MP ID MP Name Annotation
HP:0001279SyncopeMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0002092Pulmonary hypertensionMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0001785Ankle swellingMP:0014167ectopic bonethe appearance of an extra bone structure at an atypical location
HP:0001635Congestive heart failureMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0002094DyspneaMP:0014185cerebellum atrophyacquired diminution of the size of the cerebellum associated with wasting as from death and reabsorption of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal
HP:0001667Right ventricular hypertrophyMP:0013241embryo tissue necrosismorphological changes resulting from pathological death of some or all embryo tissue; usually due to irreversible damage
HP:0100749Chest painMP:0020154impaired humoral immune responseimpaired response of the immune system that mediates secreted antibodies produced in B cells
HP:0003549Abnormality of connective tissueMP:0014179abnormal blood-retinal barrier functionanomaly in the function of the part of the blood-ocular barrier that consists of cells that are joined tightly together to prevent certain substances from entering the tissue of the retina; the BRB consists of non-fenestrated capillaries of the retinal ci
HP:0005317Increased pulmonary vascular resistanceMP:0013401increased endometrial gland numbergreater than normal numbers of the simple or branched tubular glands found in the mucus membrane of the uterus
HP:0030148Heart murmurMP:0014185cerebellum atrophyacquired diminution of the size of the cerebellum associated with wasting as from death and reabsorption of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal
HP:0004870Chronic hemolytic anemiaMP:0011178increased erythroblast numbergreater number of the nucleated precursor of erythrocytes
HP:0010741Edema of the lower limbsMP:0013258abnormal extracellular matrix morphologyany structural anomaly of the structure lying external to one or more cells, which provides structural support for cells or tissues; in mammals, the extracellular matrix is completely external to the cell
HP:0001962PalpitationsMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0005180Tricuspid regurgitationMP:0013241embryo tissue necrosismorphological changes resulting from pathological death of some or all embryo tissue; usually due to irreversible damage
HP:0002105HemoptysisMP:0011098embryonic lethality during organogenesis, complete penetrancedeath of all organisms of a given genotype in a population between embryo turning and the completion of organogenesis (Mus: E9-9.5 to less than E14)
Disease ID 820
Disease idiopathic pulmonary arterial hypertension
Case(Waiting for update.)